resolveReads: Compares the full backsplice candidate set with reads that...
In KasperThystrup/circulaR: Characterization of circRNAs from Total RNA-seq data
Description
Compares the full backsplice candidate set with reads that are ambiguously mapped to the known junctions,
and deselcts all ambiguous reads. The ambiguous reads that can be rescued are then defined and included.
Finally the selected backsplice sites are fully annotated and returned.
Usage
1
resolveReads(cbs, ambiguousHits, toRescue, donors, acceptors)
KasperThystrup/circulaR documentation built on March 14, 2021, 12:44 p.m.
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Description
Compares the full backsplice candidate set with reads that are ambiguously mapped to the known junctions, and deselcts all ambiguous reads. The ambiguous reads that can be rescued are then defined and included. Finally the selected backsplice sites are fully annotated and returned.
Usage
1 | resolveReads(cbs, ambiguousHits, toRescue, donors, acceptors)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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