A preprocessing pipeline for single cell RNA-seq data that starts from the fastq files and produces a gene count matrix with associated quality control information. It can process fastq data generated by CEL-seq, MARS-seq, Drop-seq, Chromium 10x and SMART-seq protocols.
|Bioconductor views||GeneExpression GenomeAnnotation ImmunoOncology Preprocessing QualityControl RNASeq SequenceMatching Sequencing SingleCell Software Visualization|
|Maintainer||Luyi Tian <email@example.com>|
|License||GPL (>= 2)|
|Package repository||View on GitHub|
Install the latest version of this package by entering the following in R:
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.