query_pval_bcftools: Query p-value using bcftools
In MRCIEU/gwasvcf: Tools for Dealing with GWAS Summary Data in VCF Format
query_pval_bcftools R Documentation
Query p-value using bcftools
Description
Query p-value using bcftools
Usage
query_pval_bcftools(pval, vcffile, id = NULL)
Arguments
pval
P-value threshold (NOT -log10)
vcffile
Path to .vcf.gz GWAS summary data file
id
If multiple GWAS datasets in the vcf file, the name (sample ID) from which to perform the filter
Value
vcf object
MRCIEU/gwasvcf documentation built on Sept. 11, 2023, 7:50 p.m.
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| query_pval_bcftools | R Documentation |
Query p-value using bcftools
Description
Query p-value using bcftools
Usage
query_pval_bcftools(pval, vcffile, id = NULL)
Arguments
pval |
P-value threshold (NOT -log10) |
vcffile |
Path to .vcf.gz GWAS summary data file |
id |
If multiple GWAS datasets in the vcf file, the name (sample ID) from which to perform the filter |
Value
vcf object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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