query_rsid_file: Query vcf file, extracting by rsid
In MRCIEU/gwasvcf: Tools for Dealing with GWAS Summary Data in VCF Format
query_rsid_file R Documentation
Query vcf file, extracting by rsid
Description
Query vcf file, extracting by rsid
Usage
query_rsid_file(rsid, vcffile, id = NULL, build = "GRCh37")
Arguments
rsid
Vector of rsids. Use DBSNP build (???)
vcffile
Path to .vcf.gz GWAS summary data file
id
If multiple GWAS datasets in the vcf file, the name (sample ID) from which to perform the filter
build
Default="GRCh37" Build of vcffile
Value
VCF object
MRCIEU/gwasvcf documentation built on Sept. 11, 2023, 7:50 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| query_rsid_file | R Documentation |
Query vcf file, extracting by rsid
Description
Query vcf file, extracting by rsid
Usage
query_rsid_file(rsid, vcffile, id = NULL, build = "GRCh37")
Arguments
rsid |
Vector of rsids. Use DBSNP build (???) |
vcffile |
Path to .vcf.gz GWAS summary data file |
id |
If multiple GWAS datasets in the vcf file, the name (sample ID) from which to perform the filter |
build |
Default="GRCh37" Build of vcffile |
Value
VCF object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.