query_pval_vcf: Query based on p-value threshold from vcf
In MRCIEU/gwasvcf: Tools for Dealing with GWAS Summary Data in VCF Format
query_pval_vcf R Documentation
Query based on p-value threshold from vcf
Description
Query based on p-value threshold from vcf
Usage
query_pval_vcf(pval, vcf, id = NULL)
Arguments
pval
P-value threshold (NOT -log10)
vcf
VCF object (e.g. from readVcf)
id
If multiple GWAS datasets in the vcf file, the name (sample ID) from which to perform the filter
Value
VCF object
MRCIEU/gwasvcf documentation built on Sept. 11, 2023, 7:50 p.m.
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| query_pval_vcf | R Documentation |
Query based on p-value threshold from vcf
Description
Query based on p-value threshold from vcf
Usage
query_pval_vcf(pval, vcf, id = NULL)
Arguments
pval |
P-value threshold (NOT -log10) |
vcf |
VCF object (e.g. from readVcf) |
id |
If multiple GWAS datasets in the vcf file, the name (sample ID) from which to perform the filter |
Value
VCF object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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