README.md

Perform fast queries in R against a massive database of complete GWAS summary data

Lifecycle:
experimental R build status codecov

The IEU GWAS database comprises over 10,000 curated, QC'd and harmonised complete GWAS summary datasets and can be queried using an API. See here for documentation on the API itself. This R package is a wrapper to make generic calls to the API, plus convenience functions for specific queries.

Methods currently implemented:

There are a few convenience functions also:

See [https://github.com/MRCIEU/gwasglue] for information about how to connect the genotype and LD data to other packages involving colocalisation, finemapping, visualisation and MR.

Installation

You can install the developer version of ieugwasr with:

devtools::install_github("mrcieu/ieugwasr")

Browse the vignettes etc for information on how to use this package: https://mrcieu.github.io/ieugwasr/



MRCIEU/ieugwasr documentation built on May 8, 2021, 4:18 a.m.