selectMultiLevelLabels: Select significant labels across heirarchy

In PFPrzytycki/CellWalkR: An R Package for Integrating and Visualizing Single-Cell and Bulk Data to Resolve Regulatory Elements

Select significant labels across heirarchy

Description

selectMultiLevelLabels() Determines labels across heirarchy for bulk data by mapping them via the calculated information matrix

Usage

selectMultiLevelLabels(cellWalk, labelScores, z = 2)

Arguments

cellWalk	a cellWalk object
labelScores	a matrix of label scores, output of labelBulk with allScores set to TRUE
z	numeric z-score threshold for significance

Value

list of signficant labels for each region in bulk data

Examples

data("SampleCellWalkRData")
cellWalk <- clusterLabels(SampleCellWalkRData$cellWalk)
## Not run: selectMultiLevelLabels(cellWalk,SampleCellWalkRData$labelScores)

PFPrzytycki/CellWalkR documentation built on Oct. 26, 2023, 1:50 p.m.