combineMultiLabelGraph: Generate combined graph with list of label edges

In PFPrzytycki/CellWalkR: An R Package for Integrating and Visualizing Single-Cell and Bulk Data to Resolve Regulatory Elements

Generate combined graph with list of label edges

Description

combineMultiLabelGraph() combines list of weighted label edges with cell edges into a single graph

Usage

combineMultiLabelGraph(labelEdgesList, cellEdges, weights)

Arguments

labelEdgesList	list of matrices each with dimensions c-by-l
cellEdges	matrix with dimensions c-by-c
weights	numeric vector indicating label edge weight for each label edge in list

Value

combined matrix with dimensions (c+L)-by-(c+L) where L is the sum of l's

Examples

data("SampleCellWalkRData")
labelEdgesList <- list(SampleCellWalkRData$labelEdges)
combineMultiLabelGraph(labelEdgesList, SampleCellWalkRData$cellEdges)

PFPrzytycki/CellWalkR documentation built on Oct. 26, 2023, 1:50 p.m.