run_bgzip_rsamtools: Run bgzip: Rsamtools

In RajLabMSSM/echotabix: echoverse module: automated creation and querying of tabix files

Run bgzip: Rsamtools

Description

Support function for run_bgzip.

Usage

run_bgzip_rsamtools(target_path, bgz_file, force_new = TRUE, verbose = TRUE)

Arguments

target_path	Path to full GWAS/QTL summary statistics file.
bgz_file	Path to resulting bgz-compressed file after target_path has been converted to tabix format.
force_new	Force the creation of a new bgzip file (.bgz) and a new tabix index file (.tbi).
verbose	Print messages.

RajLabMSSM/echotabix documentation built on Nov. 21, 2023, 8:02 a.m.