all_plots_save_function: all_plots_save_function

In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox

all_plots_save_function

Description

Function to automatically save plots to directory of interest

Usage

all_plots_save_function(
  gobject,
  plot_object,
  save_dir = NULL,
  save_folder = NULL,
  save_name = NULL,
  default_save_name = "giotto_plot",
  save_format = NULL,
  show_saved_plot = F,
  ncol = 1,
  nrow = 1,
  scale = 1,
  base_width = NULL,
  base_height = NULL,
  base_aspect_ratio = NULL,
  units = NULL,
  dpi = NULL,
  limitsize = TRUE,
  ...
)

Arguments

gobject	giotto object
plot_object	object to plot
save_dir	directory to save to
save_folder	folder in save_dir to save to
save_name	name of plot
default_save_name	default name to save a plot
save_format	format (e.g. png, tiff, pdf, ...)
show_saved_plot	load & display the saved plot
ncol	number of columns
nrow	number of rows
scale	scale
base_width	width
base_height	height
base_aspect_ratio	aspect ratio
units	units
dpi	Plot resolution
limitsize	When TRUE (the default), ggsave will not save images larger than 50x50 inches, to prevent the common error of specifying dimensions in pixels.
...	additional parameters to ggplot_save_function or general_save_function

See Also

general_save_function

RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.