annotateSpatialNetwork: annotateSpatialNetwork
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
View source: R/spatial_structures.R
annotateSpatialNetwork R Documentation
annotateSpatialNetwork
Description
Annotate spatial network with cell metadata information.
Usage
annotateSpatialNetwork(
gobject,
spatial_network_name = "Delaunay_network",
cluster_column,
create_full_network = F
)
Arguments
gobject
giotto object
spatial_network_name
name of spatial network to use
cluster_column
name of column to use for clusters
create_full_network
convert from reduced to full network representation
Value
annotated network in data.table format
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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View source: R/spatial_structures.R
| annotateSpatialNetwork | R Documentation |
annotateSpatialNetwork
Description
Annotate spatial network with cell metadata information.
Usage
annotateSpatialNetwork(
gobject,
spatial_network_name = "Delaunay_network",
cluster_column,
create_full_network = F
)
Arguments
gobject |
giotto object |
spatial_network_name |
name of spatial network to use |
cluster_column |
name of column to use for clusters |
create_full_network |
convert from reduced to full network representation |
Value
annotated network in data.table format
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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