calc_spatial_enrichment_matrix: calc_spatial_enrichment_matrix
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
calc_spatial_enrichment_matrix R Documentation
calc_spatial_enrichment_matrix
Description
calculate spatial enrichment using a matrix approach
Usage
calc_spatial_enrichment_matrix(
spatial_network,
bin_matrix,
adjust_method = "fdr",
do_fisher_test = TRUE,
do_parallel = TRUE,
cores = NA,
calc_hub = FALSE,
hub_min_int = 3,
verbose = TRUE
)
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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| calc_spatial_enrichment_matrix | R Documentation |
calc_spatial_enrichment_matrix
Description
calculate spatial enrichment using a matrix approach
Usage
calc_spatial_enrichment_matrix(
spatial_network,
bin_matrix,
adjust_method = "fdr",
do_fisher_test = TRUE,
do_parallel = TRUE,
cores = NA,
calc_hub = FALSE,
hub_min_int = 3,
verbose = TRUE
)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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