cal_expr_residual: cal_expr_residual
In RubD/Giotto: Spatial Single-Cell Transcriptomics Toolbox
cal_expr_residual R Documentation
cal_expr_residual
Description
Calculate gene expression residual (observed_exp - DWLS_predicted)
Usage
cal_expr_residual(
gobject,
expression_values = c("normalized", "scaled", "custom"),
ave_celltype_exp
)
Arguments
gobject
giotto object
expression_values
expression values to use
ave_celltype_exp
average expression matrix in cell types
RubD/Giotto documentation built on April 29, 2023, 5:52 p.m.
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| cal_expr_residual | R Documentation |
cal_expr_residual
Description
Calculate gene expression residual (observed_exp - DWLS_predicted)
Usage
cal_expr_residual(
gobject,
expression_values = c("normalized", "scaled", "custom"),
ave_celltype_exp
)
Arguments
gobject |
giotto object |
expression_values |
expression values to use |
ave_celltype_exp |
average expression matrix in cell types |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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