reads_covering_haplotypes.read_table: For each haplotype, return reads that match haplotype at...

In SLeviyang/RegressHaplo: Haplotype Reconstruction Using Penalized Regression

For each haplotype, return reads that match haplotype at covered positions

Description

For each haplotype, return reads that match haplotype at covered positions

Usage

reads_covering_haplotypes.read_table(df, h)

Arguments

df	read table
h	haplotype matrix

Value

A R by K logical matrix where R is number of reads and K is number of haplotypes. A TRUE entry means the read covers the haplotype.

SLeviyang/RegressHaplo documentation built on June 1, 2022, 10:48 p.m.