reconstructed_position_pair_frequencies.error: Extract the position pair frequencies from haplotypes
In SLeviyang/RegressHaplo: Haplotype Reconstruction Using Penalized Regression
reconstructed_position_pair_frequencies.error R Documentation
Extract the position pair frequencies from haplotypes
Description
Extract the position pair frequencies from haplotypes
Usage
reconstructed_position_pair_frequencies.error(haplotypes, freq, pair_df)
Arguments
haplotypes
a character vector of haplotypes
freq
a numeric vector of haplotype frequencies
pair_df
data.frame produced by position_pairs.error giving
position pairs to consider
Value
a data.frame with columns pos1, pos2, nuc1, nuc2, nuc, freq
where nuc1, nuc2 are the nucleotides at pos1 and pos2, nuc is nuc1+nuc2,
and freq is the frequency
SLeviyang/RegressHaplo documentation built on June 1, 2022, 10:48 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| reconstructed_position_pair_frequencies.error | R Documentation |
Extract the position pair frequencies from haplotypes
Description
Extract the position pair frequencies from haplotypes
Usage
reconstructed_position_pair_frequencies.error(haplotypes, freq, pair_df)
Arguments
haplotypes |
a character vector of haplotypes |
freq |
a numeric vector of haplotype frequencies |
pair_df |
data.frame produced by position_pairs.error giving position pairs to consider |
Value
a data.frame with columns pos1, pos2, nuc1, nuc2, nuc, freq where nuc1, nuc2 are the nucleotides at pos1 and pos2, nuc is nuc1+nuc2, and freq is the frequency
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.