ParseNodeSize: ParseNodeSize

In SofieVG/FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data

ParseNodeSize

Description

Parses node size

Usage

ParseNodeSize(nodeSizes, maxNodeSize, refNodeSize)

Arguments

nodeSizes	A vector with node sizes
maxNodeSize	Determines the maximum node size.
refNodeSize	Reference for node size against which the nodeSizes will be scaled. Default = max(nodeSizes)

Details

Function that parses the mapping of the FlowSOM object into node sizes relative to the abundances of cells per cluster

Scales node size relative to the abundances of cells per cluster

Value

A vector is returned consisting of node sizes

See Also

PlotFlowSOM, ParseEdges, AutoMaxNodeSize, ParseArcs, ParseQuery, ParseSD

SofieVG/FlowSOM documentation built on Feb. 1, 2024, 11:33 a.m.