sample_correlation_plot: Plot sample count correlations
In TeamMacLean/atacr: Analysing Capture Seq Count Data
Description
Plot sample count correlations
Usage
1
sample_correlation_plot(data, which = "bait_windows", method = "pearson")
Arguments
data
a list of SummarizedExperiment objects from atacr::make_counts()
which
the subdivision of the genome to calculate correlations either 'whole_genome', 'bait_windows' or 'non_bait_windows'
method
the correlation method to use. Any supported by 'cor()' is useable
TeamMacLean/atacr documentation built on May 9, 2019, 4:24 p.m.
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Description
Plot sample count correlations
Usage
1 | sample_correlation_plot(data, which = "bait_windows", method = "pearson")
|
Arguments
data |
a list of SummarizedExperiment objects from atacr::make_counts() |
which |
the subdivision of the genome to calculate correlations either 'whole_genome', 'bait_windows' or 'non_bait_windows' |
method |
the correlation method to use. Any supported by 'cor()' is useable |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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