scale_factor_normalise: normalise by a provided set of scaling factors
In TeamMacLean/atacr: Analysing Capture Seq Count Data
Description
Usage
Arguments
Value
Description
normalise by a provided set of scaling factors
Usage
1
scale_factor_normalise(data, which = "bait_windows", scaling_factors = NULL)
Arguments
data
a list of SummarizedExperiment objects from atacr::make_counts()
which
the subdivision of the genome to calculate correlations either 'whole_genome', 'bait_windows' or 'non_bait_windows'
scaling_factors
a vector of scaling factors to normalise by
Value
a SummarizedExperiment with scale normalised window values
TeamMacLean/atacr documentation built on May 9, 2019, 4:24 p.m.
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Description Usage Arguments Value
Description
normalise by a provided set of scaling factors
Usage
1 | scale_factor_normalise(data, which = "bait_windows", scaling_factors = NULL)
|
Arguments
data |
a list of SummarizedExperiment objects from atacr::make_counts() |
which |
the subdivision of the genome to calculate correlations either 'whole_genome', 'bait_windows' or 'non_bait_windows' |
scaling_factors |
a vector of scaling factors to normalise by |
Value
a SummarizedExperiment with scale normalised window values
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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