Description Usage Format Details
The data ‘sim_counts' is a simulated data set with computer generated window counts for three replicates of each of two conditions in experiments with 500 bait and non-bait windows. We’ll set each experiment to have 10 % of windows differentially accessible at a difference of approximately 2 fold.
The data ‘sim_counts' is a simulated data set with computer generated window counts for three replicates of each of two conditions in experiments with 500 bait and non-bait windows. We’ll set each experiment to have 10 % of windows differentially accessible at a difference of approximately 2 fold.
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A SummarizedExperiment object
Counts in bait windows for "control" samples will be modelled as C \sim NB(μ = 30, size = 10μ).
Counts in bait windows for "treatment" samples will be modelled as C \cdot unif(0.8,1.2).
Differentially accessible bait windows will be modelled as C_{1..50} \cdot \mathcal{N}( μ=2,σ = μ/2)
Counts in bait windows for "control" samples will be modelled as C \sim NB(μ = 30, size = 10μ).
Counts in bait windows for "treatment" samples will be modelled as C \cdot unif(0.8,1.2).
Differentially accessible bait windows will be modelled as C_{1..50} \cdot \mathcal{N}( μ=2,σ = μ/2)
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