ns.gen.tile: Generate sequence tiles
In UvA-MAD/SeqLibR: Sequence Library
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Given a sequence generate a vector of subsequences
Usage
1
ns.gen.tile(seq,len=60,step=1,circular=0)
Arguments
seq
A sequences in standard IUB/IUPAC nucleic acid codes
len
the length of the subsequence
step
the step size
circular
if not zero assume a circular sequence
Details
It is ment for genetic sequences but will work for any string.
Value
A vector of strings containing the subsequences
Author(s)
Wim de Leeuw
Examples
1
ns.gen.tile("CGCGGGGCATTATATCTACTACTAGTATCT",10,2);
UvA-MAD/SeqLibR documentation built on May 9, 2019, 9:40 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s) Examples
Description
Given a sequence generate a vector of subsequences
Usage
1 | ns.gen.tile(seq,len=60,step=1,circular=0)
|
Arguments
seq |
A sequences in standard IUB/IUPAC nucleic acid codes |
len |
the length of the subsequence |
step |
the step size |
circular |
if not zero assume a circular sequence |
Details
It is ment for genetic sequences but will work for any string.
Value
A vector of strings containing the subsequences
Author(s)
Wim de Leeuw
Examples
1 | ns.gen.tile("CGCGGGGCATTATATCTACTACTAGTATCT",10,2);
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.