SingleRasterMap: A single heatmap from ggplot2 using geom_raster. Copy from...

In WilsonImmunologyLab/LinQView: Integrate information from both transcriptome and cell surface protein signals to better identify cell heterogeneity

Description

A single heatmap from ggplot2 using geom_raster. Copy from Seurat

Usage

SingleRasterMap(
  data,
  raster = TRUE,
  cell.order = NULL,
  feature.order = NULL,
  colors = PurpleAndYellow(),
  disp.min = -2.5,
  disp.max = 2.5,
  limits = NULL,
  group.by = NULL
)

Arguments

data	A matrix or data frame with data to plot
raster	switch between geom_raster and geom_tile
cell.order	...
feature.order	...
disp.min	Minimum display value (all values below are clipped)
disp.max	Maximum display value (all values above are clipped)
limits	A two-length numeric vector with the limits for colors on the plot
group.by	A vector to group cells by, should be one grouping identity per cell
cols	A vector of colors to use

WilsonImmunologyLab/LinQView documentation built on Jan. 3, 2022, 10 p.m.