gridDimPlot: gridDimPlot

In WilsonImmunologyLab/LinQView: Integrate information from both transcriptome and cell surface protein signals to better identify cell heterogeneity

Description

grid dim plot for RNA, ADT and joint analysis

Usage

gridDimPlot(
  object = NULL,
  assays = c("RNA", "ADT", "Joint"),
  darkTheme = TRUE,
  legend = TRUE,
  figure.label.size = 7,
  cluster.label = TRUE,
  cluster.lable.size = 5,
  wide.rel = 1.5,
  height.rel = 1
)

Arguments

object	seurat object
assays	assays user want to plot and compare
darkTheme	switch for darkTheme (TRUE or FALSE)
legend	switch for showing legend in each sub plot (TRUE or FALSE)
figure.label.size	font size for figure labels
cluster.label	swicth for showing cluster label on each sub plot (TRUE or FALSE)
cluster.lable.size	font size for cluster labels
wide.rel	relative width of figure label to the left. size of plots is 3.
height.rel	relative height of figure label on the top. size of plots is 3.

WilsonImmunologyLab/LinQView documentation built on Jan. 3, 2022, 10 p.m.