generatePermutationNull: Generate random signatures for a null distribution by...

View source: R/methods-Signature.R

generatePermutationNullR Documentation

Generate random signatures for a null distribution by permuting the data

Description

Generate random signatures for a null distribution by permuting the data

Usage

generatePermutationNull(eData, sigData, num)

Arguments

eData

the data to use for the permutations

sigData

list of signature objects random signature sizes

num

the number of signatures to generate

Value

A list with two items:

randomSigs: a list of lists of Signature objects. Each sub-list represents permutation signatures generated for a specific size/balance

sigAssignments: named factor vector assigning signatures to random background groups


YosefLab/VISION documentation built on June 14, 2024, 5:27 p.m.