hsInit: Init Hotspot object from Vision Object
In YosefLab/VISION: Functional interpretation of single cell RNA-seq latent manifolds
View source: R/methods-Module.R
hsInit R Documentation
Init Hotspot object from Vision Object
Description
Init Hotspot object from Vision Object
Usage
hsInit(object, model = "normal", tree = F, num_umi = NULL, logdata = FALSE)
Arguments
object
the Vision Object
model
the model for Hotspot (ie "normal", "danb"...)
tree
boolean, whether to use the tree as ls
num_umi
df of barcodes x num_umi
logdata
boolean, log the expression data, avoid for danb
Value
the Hotspot object
YosefLab/VISION documentation built on Feb. 19, 2023, 9:50 p.m.
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View source: R/methods-Module.R
| hsInit | R Documentation |
Init Hotspot object from Vision Object
Description
Init Hotspot object from Vision Object
Usage
hsInit(object, model = "normal", tree = F, num_umi = NULL, logdata = FALSE)
Arguments
object |
the Vision Object |
model |
the model for Hotspot (ie "normal", "danb"...) |
tree |
boolean, whether to use the tree as ls |
num_umi |
df of barcodes x num_umi |
logdata |
boolean, log the expression data, avoid for danb |
Value
the Hotspot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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