matrix_chisq: Perform 1vAll factor analysis given a factor matrix and group...
In YosefLab/VISION: Functional interpretation of single cell RNA-seq latent manifolds
matrix_chisq R Documentation
Perform 1vAll factor analysis given a factor matrix and group definition
Description
Given indices in cluster_ii, compute the chisq test
on every column for values in cluster_ii vs the rest.
Usage
matrix_chisq(factorDF, cluster_ii)
Arguments
factorDF
dataframe of factors
cluster_ii
numeric vector - indices denoting the group to be compared
Value
pval - numeric vector, pvalue for each column
stat - numeric vector, test statistic (Cramer's V) for each column
YosefLab/VISION documentation built on Feb. 19, 2023, 9:50 p.m.
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| matrix_chisq | R Documentation |
Perform 1vAll factor analysis given a factor matrix and group definition
Description
Given indices in cluster_ii, compute the chisq test on every column for values in cluster_ii vs the rest.
Usage
matrix_chisq(factorDF, cluster_ii)
Arguments
factorDF |
dataframe of factors |
cluster_ii |
numeric vector - indices denoting the group to be compared |
Value
pval - numeric vector, pvalue for each column
stat - numeric vector, test statistic (Cramer's V) for each column
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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