sigsVsProjection_pcf: Evaluates the significance of each meta data factor signature...
In YosefLab/VISION: Functional interpretation of single cell RNA-seq latent manifolds
View source: R/methods-Signature.R
sigsVsProjection_pcf R Documentation
Evaluates the significance of each meta data factor signature vs. a
single projections weights
Description
Evaluates the significance of each meta data factor signature vs. a
single projections weights
Usage
sigsVsProjection_pcf(metaData, weights, cells = NULL)
Arguments
metaData
data.frame of meta-data for cells
weights
numeric matrix of dimension N_SAMPLES x N_SAMPLES
cells
list of cell names. Subsets anlysis to provided cells.
If omitted, use all cells.
Value
list:
consistency: consistency scores
pvals: pvalues
YosefLab/VISION documentation built on Feb. 19, 2023, 9:50 p.m.
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View source: R/methods-Signature.R
| sigsVsProjection_pcf | R Documentation |
Evaluates the significance of each meta data factor signature vs. a single projections weights
Description
Evaluates the significance of each meta data factor signature vs. a single projections weights
Usage
sigsVsProjection_pcf(metaData, weights, cells = NULL)
Arguments
metaData |
data.frame of meta-data for cells |
weights |
numeric matrix of dimension N_SAMPLES x N_SAMPLES |
cells |
list of cell names. Subsets anlysis to provided cells. If omitted, use all cells. |
Value
list:
consistency: consistency scores
pvals: pvalues
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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