gene_over_pseudotime: Gene expression with uncertainty over pseudotime
In Yutong441/TBdev: Infer a Trophoblast Developmental Trajectory

Gene expression with uncertainty over pseudotime

gene_over_pseudotime(
  x,
  exp_mat,
  genes,
  color_feature,
  metadata = NULL,
  num_col = 4,
  num_row = NULL,
  branch_assignment = NULL,
  peak_data = NULL,
  time_col = "pseudotime",
  gene_col = "feature",
  slot_data = "data",
  assay = "RNA",
  plot_ribbon = F,
  plot_line = F,
  AP = NULL
)

`x`	dataframe containing mean + var information estimated by BRGP
`exp_mat`	the expression matrix, i.e. true expression levels, or it can be a seurat object
`genes`	the genes to be plotted