PlotPhyMsa: A multi-plot wrapper to generate an MSA plot from input.msa...
In ababaian/palmid: Viral RNA Dependent RNA Polymerase Analysis Suite
PlotPhyMsa R Documentation
A multi-plot wrapper to generate an MSA plot from input.msa and
align it with a phylogenetic tree plot.
Description
A multi-plot wrapper to generate an MSA plot from input.msa and
align it with a phylogenetic tree plot.
Usage
PlotPhyMsa(input.msa, p)
Arguments
input.msa
msa file path relative OR AAStringSet MSA object
p
phylogeny visualization object. use PlotPhy
Value
A single object consisting of two facets for tree and MSA
Examples
data("waxsys.msa")
data("waxsys.tree.phy")
p <- PlotPhy(waxsys.tree.df, waxsys.tree.phy)
plotPhyMsa <- PlotPhyMsa(waxsys.msa, p)
ababaian/palmid documentation built on July 1, 2023, 1:09 a.m.
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| PlotPhyMsa | R Documentation |
A multi-plot wrapper to generate an MSA plot from input.msa and align it with a phylogenetic tree plot.
Description
A multi-plot wrapper to generate an MSA plot from input.msa and align it with a phylogenetic tree plot.
Usage
PlotPhyMsa(input.msa, p)
Arguments
input.msa |
msa file path relative OR AAStringSet MSA object |
p |
phylogeny visualization object. use PlotPhy |
Value
A single object consisting of two facets for tree and MSA
Examples
data("waxsys.msa")
data("waxsys.tree.phy")
p <- PlotPhy(waxsys.tree.df, waxsys.tree.phy)
plotPhyMsa <- PlotPhyMsa(waxsys.msa, p)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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