PlotTaxHist: Plot Percent-identity, factored on taxonomic strings of a pro...
In ababaian/palmid: Viral RNA Dependent RNA Polymerase Analysis Suite

PlotTaxHist

R Documentation

Plot Percent-identity, factored on taxonomic strings of a pro df

Description

Plot Percent-identity, factored on taxonomic strings of a pro df

Usage

PlotTaxHist(pro.pident, pro.tax, rank = NA)

Arguments

`pro.pident`	numeric, pident column from pro.df
`pro.tax`	character, tax column from pro.df (use: get.palmTax)
`rank`	character, string of tax-rank to label graph

Value

A histogram as a ggplot2 object

Examples


data("waxsys.pro.df")

taxHist <- PlotTaxHist(pro.pident = waxsys.pro.df$pident,
                       pro.tax    = waxsys.pro.df$tfam,
                       rank       = "family")

ababaian/palmid documentation built on July 1, 2023, 1:09 a.m.