get.proTax2: A wrapper for get.palmTax() specific for 'pro.df' input and...
In ababaian/palmid: Viral RNA Dependent RNA Polymerase Analysis Suite
get.proTax2 R Documentation
A wrapper for get.palmTax() specific for 'pro.df' input
and returns a populated the "tspe", "tfam", and "tphy"
columns of 'pro.df' based on the "sseqid" column
Description
A wrapper for get.palmTax() specific for 'pro.df' input
and returns a populated the "tspe", "tfam", and "tphy"
columns of 'pro.df' based on the "sseqid" column
Usage
get.proTax2(pro.df, con = SerratusConnect())
Arguments
pro.df
data.frame, imported diamond pro df. use get.pro()
con
pq-connection, use SerratusConnect()
Value
pro.df data.frame
Examples
## Prepare data
# data("waxsys.pro.df")
# con <- SerratusConnect()
## Generate Report
# geoSRA <- PlotGeoReport( waxsys.pro.df )
ababaian/palmid documentation built on July 1, 2023, 1:09 a.m.
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| get.proTax2 | R Documentation |
A wrapper for get.palmTax() specific for 'pro.df' input and returns a populated the "tspe", "tfam", and "tphy" columns of 'pro.df' based on the "sseqid" column
Description
A wrapper for get.palmTax() specific for 'pro.df' input and returns a populated the "tspe", "tfam", and "tphy" columns of 'pro.df' based on the "sseqid" column
Usage
get.proTax2(pro.df, con = SerratusConnect())
Arguments
pro.df |
data.frame, imported diamond pro df. use get.pro() |
con |
pq-connection, use SerratusConnect() |
Value
pro.df data.frame
Examples
## Prepare data
# data("waxsys.pro.df")
# con <- SerratusConnect()
## Generate Report
# geoSRA <- PlotGeoReport( waxsys.pro.df )
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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