load_sadanandam_signature: Loading Sadanandam's subtype signatures.
In aeolianine/CRCsubtyping: Subtyping Colorectal Expression Data
View source: R/load_signatures.R
load_sadanandam_signature R Documentation
Loading Sadanandam's subtype signatures.
Description
Reference: Sadanandam et al (2013). A colorectal cancer classification system that associates cellular phenotype and responses to therapy. Nature Medicine, 19(5), 619–25. doi:10.1038/nm.3175.
Note: In the paper these genes are refered to as "CRCassigner-786"
Usage
load_sadanandam_signature()
Arguments
NULL,
no inputs
Value
data frame of 786 genes by 5 subtypes; entries are relative expression values in the 5 subtype centroids
See Also
load_schlicker_signature and load_CMS_genes
Examples
sigs = load_sadanandam_signature()
print(sigs$Inflammatory)
aeolianine/CRCsubtyping documentation built on Jan. 13, 2023, 12:16 p.m.
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View source: R/load_signatures.R
| load_sadanandam_signature | R Documentation |
Loading Sadanandam's subtype signatures.
Description
Reference: Sadanandam et al (2013). A colorectal cancer classification system that associates cellular phenotype and responses to therapy. Nature Medicine, 19(5), 619–25. doi:10.1038/nm.3175. Note: In the paper these genes are refered to as "CRCassigner-786"
Usage
load_sadanandam_signature()
Arguments
NULL, |
no inputs |
Value
data frame of 786 genes by 5 subtypes; entries are relative expression values in the 5 subtype centroids
See Also
load_schlicker_signature and load_CMS_genes
Examples
sigs = load_sadanandam_signature() print(sigs$Inflammatory)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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