plotSubtypesCMS.SSP: Visualization of the results of subtypeCMS.SSP(). Creates...
In aeolianine/CRCsubtyping: Subtyping Colorectal Expression Data
plotSubtypesCMS.SSP R Documentation
Visualization of the results of subtypeCMS.SSP().
Creates barplot of assigned predicted and nearest subtypes.
Also plots a heatmap of the computed correlations to all subtype centroids.
Description
Visualization of the results of subtypeCMS.SSP().
Creates barplot of assigned predicted and nearest subtypes.
Also plots a heatmap of the computed correlations to all subtype centroids.
Usage
plotSubtypesCMS.SSP(res)
Arguments
res
- the result of subtypeCMS.SSP()
Value
two plots, a barplot and a correlations heatmap
Examples
mat = get_TCGA_synapse()
res = subtypeCMS.SSP(mat)
plotSubtypesCMS.SSP(res)
aeolianine/CRCsubtyping documentation built on Jan. 13, 2023, 12:16 p.m.
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| plotSubtypesCMS.SSP | R Documentation |
Visualization of the results of subtypeCMS.SSP(). Creates barplot of assigned predicted and nearest subtypes. Also plots a heatmap of the computed correlations to all subtype centroids.
Description
Visualization of the results of subtypeCMS.SSP(). Creates barplot of assigned predicted and nearest subtypes. Also plots a heatmap of the computed correlations to all subtype centroids.
Usage
plotSubtypesCMS.SSP(res)
Arguments
res |
- the result of subtypeCMS.SSP() |
Value
two plots, a barplot and a correlations heatmap
Examples
mat = get_TCGA_synapse() res = subtypeCMS.SSP(mat) plotSubtypesCMS.SSP(res)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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