API for alexology/biomonitoR
biomonitoring indices and metrics

Global functions
.onAttach Source code
Pi Source code
Tree Man page
abu Source code
abuTax Man page Source code
abundance Man page Source code
abundance_classes Man page Source code
addBiasToTraits Man page Source code
add_bias_to_traits Man page Source code
agg_fun Source code
aggregate_taxa Man page Source code
aggregatoR Man page Source code
allindices Man page Source code
allrich Man page Source code
ambiguousSolver Man page Source code
as.data.frame.asb Source code
asBiomonitor Man page Source code
as_biomonitor Man page Source code
aspt Man page Source code
assign_traits Man page Source code
average_traits Man page Source code
berpar Man page Source code
bin Man page Source code
bioco Man page Source code
bmwp Man page Source code
bray_curtis Source code
brill Man page Source code
capWords Source code
checkBmwpFam Source code
checkTree Source code
classCheck Source code
combTaxa Man page Source code
combine_taxa Man page Source code
convert_to_biotic Man page Source code
convert_to_vegan Man page Source code
convertobiotic Man page Source code
convertovegan Man page Source code
countWords Source code
csi Man page Source code
cwm Man page Source code
ddis Source code
defunct Man page
dehli Man page Source code
delta Source code
delta.st Source code
dness Man page Source code
epsi Man page Source code
ept Man page Source code
eptd Man page Source code
esimpson Man page Source code
f_disp Man page Source code
f_divs Man page Source code
f_eve Man page Source code
f_red Man page Source code
f_rich Man page Source code
fdisp_k Source code
feve_k Source code
fisher Man page Source code
flow_t Man page Source code
fric_3d Source code
fuzzy_trait_ratio Man page Source code
general_info Man page Source code
get_gbif_taxa_tree Man page Source code
get_iucn_taxa_tree Man page Source code
get_nbn_taxa_tree Man page Source code
get_reference_db Man page Source code
get_taxa_abundance Man page Source code
get_taxa_richness Man page Source code
get_worms_taxa_tree Man page Source code
ibmr Man page Source code
igold Man page Source code
indval_biomonitor Source code
invberpar Man page Source code
invsimpson Man page Source code
life Man page Source code
macro_ex Man page
manageTraits Man page Source code
manage_exceptions Source code
manage_inconsistencies Source code
manage_traits Man page Source code
margalef Man page Source code
mcintosh Man page Source code
menhinick Man page Source code
mi_prin Man page
nearest Source code
nearest_neg Source code
nearest_neg_pos Source code
nearest_pos Source code
nearest_pos_neg Source code
newDictio Source code
oglio Man page
om Source code
only_char Source code
pcoaQuality Source code
pielou Man page Source code
plot.asb Man page Source code
plot.biomonitoR Man page Source code
plot_indicator_taxa Man page Source code
print.asb Source code
psi Man page Source code
qfs Source code
quickRename Man page Source code
quick_rename Man page Source code
refFromTree Man page Source code
ref_from_tree Man page Source code
remove_taxa Man page Source code
ricTax Man page Source code
richness Man page Source code
sampleTraits Man page Source code
sample_traits Man page Source code
selectPcoaAxes Man page Source code
select_pcoa_axes Man page Source code
shannon Man page Source code
show_scores Man page Source code
showscores Man page Source code
silhouette_biomonitor Source code
simpson Man page Source code
solve_ambiguous Man page Source code
specieName Source code
specieWorms Source code
subset.asb Man page Source code
suggestUserNames Source code
to_bin Man page Source code
totInfo Man page Source code
traitS Source code
traitScaling Man page Source code
traitsMean Man page Source code
traits_mf Man page
trim Source code
tsi Man page Source code
upperFirst Source code
whpt Man page Source code
zero_dist_traits Source code
alexology/biomonitoR documentation built on Oct. 10, 2024, 12:02 a.m.