plotDACellScore: Plot DA Cell Scores

In altairwei/rhapsodykit: A Set of Tools for BD Rhapsody WTA Downstream Analysis

Plot DA Cell Scores

Description

The prediction values are overlayed on the 2D embedding

Usage

plotDACellScore(
  obj,
  reduction,
  order = FALSE,
  label = FALSE,
  circle = FALSE,
  point_size = 1,
  point_alpha = 1,
  text_size = 4,
  theme_size = 10
)

Arguments

obj	DAseq results
reduction	Cell embeddings to plot
order	Order cells by DA score
label	Label cell custers
circle	Draw circle around clusters
point_size	Set point size
point_alpha	Set point alpha
text_size	Set text size
theme_size	Set theme size

Value

ggplot object

altairwei/rhapsodykit documentation built on Feb. 1, 2023, 8:52 a.m.