empirical_allelic_ratio: Empirical allelic Ratio
In anthony-aylward/chenimbalance: Allelic imbalance mapping procedure from Chen et al. A uniform survey of allele-specific binding and expression over 1000-Genomes-Project individuals (2016)
Description
Usage
Arguments
Details
Value
Description
Empirical allelic Ratio
Usage
1
empirical_allelic_ratio(data, bins, maxN, minN = 6, plot = FALSE)
Arguments
data
A data frame with columns "total" and "allelicRatio"
bins
Breakpoints for bins
Details
Plot right closed interval left open (range] for x axis
note that you have pseudozeroes as counts in your data so thats fine
Value
Histogram of allelic ratios
anthony-aylward/chenimbalance documentation built on May 17, 2019, 12:50 p.m.
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Description Usage Arguments Details Value
Description
Empirical allelic Ratio
Usage
1 | empirical_allelic_ratio(data, bins, maxN, minN = 6, plot = FALSE)
|
Arguments
data |
A data frame with columns "total" and "allelicRatio" |
bins |
Breakpoints for bins |
Details
Plot right closed interval left open (range] for x axis note that you have pseudozeroes as counts in your data so thats fine
Value
Histogram of allelic ratios
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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