Man pages for bahlolab/linkrvis
Visualise Output from Genetic Linkage Analysis Tools
| cm2bp | Convert centimorgan to bp |
| famlod | MERLIN 'famlod' Object |
| famlod2ggdata | 'famlod' GG Data Preparation |
| fampar | MERLIN 'fampar' Object |
| get_peaks | Output Linkage Regions |
| linkrvis | linkrvis: A package for visualising output from genetic... |
| npartbl | MERLIN 'npartbl' Object |
| npartbl2ggdata | 'npartbl' GG Data Preparation |
| partbl | MERLIN 'partbl' Object |
| partbl2ggdata | 'partbl' GG Data Preparation |
| plot.famlod | Plot MERLIN PerFam Nonparametric LOD Scores |
| plot.fampar | Plot MERLIN PerFam Parametric LOD Scores |
| plot.npartbl | Plot MERLIN Nonparametric LOD Scores |
| plot.partbl | Plot MERLIN Parametric Joint LOD Scores |
| print.famlod | Print Head and Tail of 'famlod' Table |
| print.fampar | Print Head and Tail of 'fampar' Table |
| print.npartbl | Print Head, Middle and Tail of 'npartbl' Table |
| print.partbl | Print Head and Tail of 'partbl' Table |
| print.summary.famlod | Print Summary of 'famlod' Object |
| print.summary.fampar | Print Summary of 'fampar' Object |
| print.summary.npartbl | Print Summary of 'npartbl' Object |
| print.summary.partbl | Print Summary of 'partbl' Object |
| read_annot | Read HapMap2 Annotation File |
| read_merlin_dat | Read MERLIN 'fam.dat' |
| read_merlin_famlod | Read MERLIN 'fam.lod' |
| read_merlin_fampar | Read MERLIN 'fam.par' |
| read_merlin_map | Read MERLIN 'fam.map' |
| read_merlin_npartbl | Read MERLIN 'nonparametric.tbl' |
| read_merlin_partbl | Read MERLIN 'parametric.tbl' |
| read_merlin_ped | Read MERLIN 'fam.ped' |
| summarise_peaks | Summarise LOD score peaks |
| summary.famlod | Return Summary of 'famlod' Object |
| summary.fampar | Return Summary of 'fampar' Object |
| summary.npartbl | Return Summary of 'npartbl' Object |
| summary.partbl | Return Summary of 'partbl' Object |
