read_merlin_ped: Read MERLIN 'fam.ped'
In bahlolab/linkrvis: Visualise Output from Genetic Linkage Analysis Tools
Description
Usage
Arguments
Details
Value
Examples
Description
Read the fam.ped file generated by LDG for MERLIN
Usage
1
read_merlin_ped(fname)
Arguments
fname
The file name to read.
Details
The fam.ped file contains N rows and 5 + M + 1 columns, where N is
the number of samples, M is the number of markers and the last column
is the affectedness status (the first five columns are always
the same - FamID, IndID, PatID, MatID and Gender).
Value
A matrix with N rows and 5 + M + 1 columns
(refer to the details section).
Examples
1
read_merlin_ped("merlin_13_famA.ped")
bahlolab/linkrvis documentation built on May 11, 2019, 5:25 p.m.
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Description Usage Arguments Details Value Examples
Description
Read the fam.ped file generated by LDG for MERLIN
Usage
1 | read_merlin_ped(fname)
|
Arguments
fname |
The file name to read. |
Details
The fam.ped file contains N rows and 5 + M + 1 columns, where N is
the number of samples, M is the number of markers and the last column
is the affectedness status (the first five columns are always
the same - FamID, IndID, PatID, MatID and Gender).
Value
A matrix with N rows and 5 + M + 1 columns
(refer to the details section).
Examples
1 | read_merlin_ped("merlin_13_famA.ped")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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