plot.partbl: Plot MERLIN Parametric Joint LOD Scores

Description Usage Arguments Value Examples

View source: R/plot_partbl.R

Description

Plots the LOD, ALPHA and HLOD scores in MERLIN's parametric.tbl file

Usage

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## S3 method for class 'partbl'
plot(partbl, vars = c("lod", "alpha", "hlod"), ylim = c(0,
  max(partbl$max_lods[c("max_lod", "max_hlod")])))

Arguments

partbl

S3 object of class partbl.

vars

Character vector indicating which variable(s) to plot. Available variables from the partbl data.frame are: "lod", "alpha" and "hlod".

ylim

Character vector of length 2 indicating the range of values to plot.

Value

ggplot object, plotting the selected variables

Examples

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pt <- partbl("foo-parametric.tbl")
plot(pt)

bahlolab/linkrvis documentation built on June 4, 2017, 12:13 a.m.