summarise_peaks: Summarise LOD score peaks
In bahlolab/linkrvis: Visualise Output from Genetic Linkage Analysis Tools

Which regions achieve a LOD score above a given threshold?

1	summarise_peaks(ld, valcol)

`ld`	A list of data.frames containing markers achieving high LOD scores.
`valcol`	A length-one character vector giving the name of the column in `d` containing the values.

A data.frame with chr, start_cm, end_cm, etc.

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partbl <- partbl::partbl("merlin_10_famA-parametric.tbl")
list_of_peaks <- get_peaks(partbl)
summarise_peaks(list_of_peaks)

bahlolab/linkrvis documentation built on May 11, 2019, 5:25 p.m.

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