summarise_peaks: Summarise LOD score peaks

Description Usage Arguments Value Examples

View source: R/peaks.R

Description

Which regions achieve a LOD score above a given threshold?

Usage

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summarise_peaks(ld, valcol)

Arguments

ld

A list of data.frames containing markers achieving high LOD scores.

valcol

A length-one character vector giving the name of the column in d containing the values.

Value

A data.frame with chr, start_cm, end_cm, etc.

Examples

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partbl <- partbl::partbl("merlin_10_famA-parametric.tbl")
list_of_peaks <- get_peaks(partbl)
summarise_peaks(list_of_peaks)

bahlolab/linkrvis documentation built on June 4, 2017, 12:13 a.m.