read_merlin_famlod: Read MERLIN 'fam.lod'

Description Usage Arguments Value Examples

View source: R/famlod.R

Description

Read the .lod file output by MERLIN.

Usage

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read_merlin_famlod(fname, chrom = as.numeric(sub(".*merlin_(\\d{1,2})_.*",
  "\\1", fname)), verbose = TRUE)

Arguments

fname

The file name to read.

chrom

The chromosome number for this file. This is the number in the filename following "merlin_" e.g. for "merlin_13_famA.lod" it will be 13.

verbose

Value

A data.frame with the columns

Examples

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read_merlin_famlod("merlin_13_famA.lod")

bahlolab/linkrvis documentation built on June 4, 2017, 12:13 a.m.