brawand.htseq.fpkm.pooled: Gene expression for Brawand et al. (ArrayExpress...
In barzine/barzinePhdData: Data to be used with barzinePhdR
Description
Gene expression for Brawand et al. (ArrayExpress E-GEOD-30352) mapped to Ensembl 76 (GRCh38)
and quantified with HTSeq-count and normalised with the FPKM method.
Then all the biological replicates have been pooled together (median values)
See for more details chapters 1 and 2 of Barzine, M.P PhD thesis:
Investigating Normal Human Gene Expression in Tissues
with High-throughput Transcriptomic and Proteomic data.
Usage
1
Format
A data frame with 44479 transcritps (ie rows/observations) for 8 Tissues (ie columns/variables)
- Frontalcortex
numeric, FPKM
- Prefrontal cortex
numeric, FPKM
- Temporal lobe
numeric, FPKM
- Cerebellum
numeric, FPKM
- Heart
numeric, FPKM
- Kidney
numeric, FPKM
- Liver
numeric, FPKM
- Testis
numeric, FPKM
barzine/barzinePhdData documentation built on April 4, 2021, 9:23 a.m.
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Description
Gene expression for Brawand et al. (ArrayExpress E-GEOD-30352) mapped to Ensembl 76 (GRCh38) and quantified with HTSeq-count and normalised with the FPKM method. Then all the biological replicates have been pooled together (median values) See for more details chapters 1 and 2 of Barzine, M.P PhD thesis: Investigating Normal Human Gene Expression in Tissues with High-throughput Transcriptomic and Proteomic data.
Usage
1 |
Format
A data frame with 44479 transcritps (ie rows/observations) for 8 Tissues (ie columns/variables)
- Frontalcortex
numeric, FPKM
- Prefrontal cortex
numeric, FPKM
- Temporal lobe
numeric, FPKM
- Cerebellum
numeric, FPKM
- Heart
numeric, FPKM
- Kidney
numeric, FPKM
- Liver
numeric, FPKM
- Testis
numeric, FPKM
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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