pandey.top3: Protein expression for Pandey Lab data mapped to Ensembl 76...

Description Usage Format

Description

Protein expression for Pandey Lab data mapped to Ensembl 76 (GRCh38) and quantified with the Top3 method (PSM) explained in the second chapter of Barzine, M.P PhD thesis: Investigating Normal Human Gene Expression in Tissues with High-throughput Transcriptomic and Proteomic data.

Usage

1

Format

A data.frame with 15245 proteins for 30 tissues and cell lines

Adrenal

numeric,normalised PSM

B cells

numeric,normalisded PSM

CD4T cells

numeric,normalised PSM

CD8T cells

numeric,normalised PSM

Colon

numeric, normalised PSM

Oesophagus

numeric, normalised PSM

Frontalcortex

numeric, normalised PSM

Gallbladder

numeric, normalised PSM

Heart

numeric, normalised PSM

Kidney

numeric, normalised PSM

Liver

numeric, normalised PSM

Lung

numeric, normalised PSM

Monocytes

numeric, normalised PSM

NK cells

numeric, normalised PSM

Ovary

numeric, normalised PSM

Pancreas

numeric, normalised PSM

Platelets

numeric, normalised PSM

Prostate

numeric, normalised PSM

Rectum

numeric, normalised PSM

Retina

numeric, normalised PSM

Spinalcord

numeric, normalised PSM

Testis

numeric, normalised PSM

Urinarybladder"

numeric, normalised PSM

Fetal Brain

numeric, normalised PSM

Fetal Gut

numeric, normalised PSM

Fetal Heart

numeric, normalised PSM

Fetal Liver

numeric, normalised PSM

Fetal Ovary

numeric, normalised PSM

Placenta

numeric, normalised PSM

Fetal Testis

numeric, normalised PSM


barzine/barzinePhdData documentation built on April 4, 2021, 9:23 a.m.