kuster.ppkm: Protein expression for Kuster Lab data mapped to Ensembl 76...

In barzine/barzinePhdData: Data to be used with barzinePhdR

Description

Protein expression for Kuster Lab data mapped to Ensembl 76 (GRCh38) and quantified with the PPKM method explained in the fifth chapter of Barzine, M.P PhD thesis: Investigating Normal Human Gene Expression in Tissues with High-throughput Transcriptomic and Proteomic data. This dataset is the same of kuster.top3.all where the uterus samples have been pooled

Usage

kuster.ppkm

Format

A data frame with 10734 proteins (ie rows/observations) for 35 tissues and body fluids (ie columns/variables)

Adrenal

numeric, PPKM

Anus

numeric, PPKM

Ascites

numeric, PPKM

Heart

numeric, PPKM

Cortex

numeric, PPKM

Cervix

numeric, PPKM

Colon

numeric, PPKM

Earwax

numeric, PPKM

Oesophagus

numeric, PPKM

Gallbladder

numeric, PPKM

Hair follicle

numeric, PPKM

Kidney

numeric, PPKM

Liver

numeric, PPKM

Lung

numeric, PPKM

Lymph node

numeric, PPKM

Milk

numeric, PPKM

Nasopharynx

numeric, PPKM

Oral cavity

numeric, PPKM

Ovary

numeric, PPKM

Pancreas

numeric, PPKM

Placenta

numeric, PPKM

Prostate

numeric, PPKM

Rectum

numeric, PPKM

Saliva

numeric, PPKM

Salivary gland

numeric, PPKM

Seminal vesicle

numeric, PPKM

Skin

numeric, PPKM

Spleen

numeric, PPKM

Stomach

numeric, PPKM

Testis

numeric, PPKM

Thyroid

numeric, PPKM

Tonsil

numeric, PPKM

Tube

numeric, PPKM

Uterus

numeric, PPKM

Vulva

numeric, PPM

barzine/barzinePhdData documentation built on April 4, 2021, 9:23 a.m.