pandey.ppkm: Protein expression for Pandey Lab data mapped to Ensembl 76...

In barzine/barzinePhdData: Data to be used with barzinePhdR

Description

Protein expression for Pandey Lab data mapped to Ensembl 76 (GRCh38) and quantified with the PPKM method explained in the fifth chapter of Barzine, M.P PhD thesis: Investigating Normal Human Gene Expression in Tissues with High-throughput Transcriptomic and Proteomic data.

Usage

pandey.ppkm

Format

A data frame with 15245 proteins (ie rows/observations) for 30 tissues (ie columns/variables)

Adrenal

numeric, PPKM

B cells

numeric, PPKM

CD4T cells

numeric, PPKM

CD8T cells

numeric, PPKM

Colon

numeric, PPKM

Oesophagus

numeric, PPKM

Fetal Brain

numeric, PPKM

Fetal Gut

numeric, PPKM

Fetal Heart

numeric, PPKM

Fetal Liver

numeric, PPKM

Fetal Ovary

numeric, PPKM

Placenta

numeric, PPKM

Fetal Testis

numeric, PPKM

Frontalcortex

numeric, PPKM

Gallbladder

numeric, PPKM

Heart

numeric, PPKM

Kidney

numeric, PPKM

Liver

numeric, PPKM

Lung

numeric, PPKM

Monocytes

numeric, PPKM

NK cells

numeric, PPKM

Ovary

numeric, PPKM

Pancreas

numeric, PPKM

Platelets

numeric, PPKM

Prostate

numeric, PPKM

Rectum

numeric, PPKM

Retina

numeric, PPKM

Spinalcord

numeric, PPKM

Testis

numeric, PPKM

Urinarybladder

numeric, PPKM

barzine/barzinePhdData documentation built on April 4, 2021, 9:23 a.m.