create_jackstrawplot: create_jackstrawplot
In bernard2012/Giotto: Spatial single-cell transcriptomics toolbox
Description
Usage
Arguments
Value
View source: R/dimension_reduction.R
Description
create jackstrawplot with ggplot
Usage
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create_jackstrawplot(
jackstraw_data,
ncp = 20,
ylim = c(0, 1),
threshold = 0.01
)
Arguments
jackstraw_data
result from jackstraw function
ncp
number of principal components to calculate
ylim
y-axis limits on jackstraw plot
threshold
p.value threshold to call a PC significant
Value
ggplot
bernard2012/Giotto documentation built on Sept. 22, 2020, 10:29 a.m.
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Description Usage Arguments Value
View source: R/dimension_reduction.R
Description
create jackstrawplot with ggplot
Usage
1 2 3 4 5 6 | create_jackstrawplot(
jackstraw_data,
ncp = 20,
ylim = c(0, 1),
threshold = 0.01
)
|
Arguments
jackstraw_data |
result from jackstraw function |
ncp |
number of principal components to calculate |
ylim |
y-axis limits on jackstraw plot |
threshold |
p.value threshold to call a PC significant |
Value
ggplot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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