fastGetTSSEnrichmentSingleThread: Get TSS Enrichment scores
In beyondpie/smmtools: Single-cell multi-omics sequenceing data tools
View source: R/QualityControl.R
fastGetTSSEnrichmentSingleThread R Documentation
Get TSS Enrichment scores
Description
Ref: ArchR
Usage
fastGetTSSEnrichmentSingleThread(
TSS,
barcodes,
rawH5File,
window = 101,
norm = 100,
flank = 2000,
minNorm = 0.2,
maxFragSize = NULL,
sampleName = NULL
)
Value
List two element: TSSE, TSSReads
dataframe with cols, barcode,TSSE,TSSRead
beyondpie/smmtools documentation built on July 1, 2022, 4:33 a.m.
R Package Documentation
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View source: R/QualityControl.R
| fastGetTSSEnrichmentSingleThread | R Documentation |
Get TSS Enrichment scores
Description
Ref: ArchR
Usage
fastGetTSSEnrichmentSingleThread( TSS, barcodes, rawH5File, window = 101, norm = 100, flank = 2000, minNorm = 0.2, maxFragSize = NULL, sampleName = NULL )
Value
List two element: TSSE, TSSReads
dataframe with cols, barcode,TSSE,TSSRead
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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