getFragsOfAChrFromRawH5File: Get fragments from a given chromsome in rawH5File. Ref: ArchR...
In beyondpie/smmtools: Single-cell multi-omics sequenceing data tools
getFragsOfAChrFromRawH5File R Documentation
Get fragments from a given chromsome in rawH5File.
Ref: ArchR .getFragsFromArrow
Description
Get fragments from a given chromsome in rawH5File.
Ref: ArchR .getFragsFromArrow
Usage
getFragsOfAChrFromRawH5File(
rawH5File,
chr = "chr1",
sampleName = NULL,
barcodes = NULL,
verbose = TRUE
)
Arguments
barcodes
vector of strings, make sure it's not a data.frame with one column.
verbose
bool, print logs when set is TRUE, default is TRUE.
Value
fragments IRanges
beyondpie/smmtools documentation built on July 1, 2022, 4:33 a.m.
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| getFragsOfAChrFromRawH5File | R Documentation |
Get fragments from a given chromsome in rawH5File. Ref: ArchR .getFragsFromArrow
Description
Get fragments from a given chromsome in rawH5File. Ref: ArchR .getFragsFromArrow
Usage
getFragsOfAChrFromRawH5File( rawH5File, chr = "chr1", sampleName = NULL, barcodes = NULL, verbose = TRUE )
Arguments
barcodes |
vector of strings, make sure it's not a data.frame with one column. |
verbose |
bool, print logs when set is TRUE, default is TRUE. |
Value
fragments IRanges
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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