API for bic-mskcc/bicrnaseq
MSKCC Bioinformatics Core RNASeq
| Global functions | |
|---|---|
| bic.add.rownames2dat | Man page |
| bic.average.by.name | Man page |
| bic.check.line.chart.data | Man page Man page |
| bic.check.picard.data | Man page Man page |
| bic.check.read.distribution.data | Man page Man page |
| bic.deseq.heatmap | Man page Man page |
| bic.deseq.normalize.htseq.counts | Man page |
| bic.deseq.plot.pca | Man page Man page |
| bic.file2matrix | Man page |
| bic.format.htseq.counts | Man page |
| bic.get.deseq.cds | Man page |
| bic.get.gene.sets | Man page |
| bic.get.package.info | Man page |
| bic.grid.arrange.shared.legend | Man page Man page |
| bic.hclust.samples | Man page Man page |
| bic.join.strings | Man page |
| bic.make.colnames | Man page |
| bic.make.rownames | Man page |
| bic.matrix2numeric | Man page |
| bic.mds.clust.samples | Man page Man page |
| bic.non.empty.file.found | Man page |
| bic.pdf.hclust | Man page Man page |
| bic.plot.5prime3prime.bias | Man page Man page |
| bic.plot.alignment.distribution | Man page Man page |
| bic.plot.alignment.summary | Man page Man page |
| bic.plot.coverage | Man page Man page |
| bic.plot.dispersion.estimates | Man page Man page |
| bic.plot.ma | Man page Man page |
| bic.plot.read.distribution | Man page Man page |
| bic.plot.rseqc.line.chart | Man page Man page |
| bic.process.gsa.res | Man page |
| bic.pval.histogram | Man page Man page |
| bic.quantile.normalize.htseq.counts | Man page |
| bic.remove.sub | Man page |
| bic.run.deseq.comparison | Man page |
| bic.run.gsa | Man page |
| bic.sample.to.sample.distances | Man page Man page |
| bic.scale.factor.quantile | Man page |
| bic.standard.heatmap | Man page Man page |
| bic.write.dat | Man page |
| bic.write.deseq.results | Man page |
| bic.write.normalized.counts.file | Man page |
