bic.sample.to.sample.distances: Draw a heatmap showing sample-to-sample distances using...
In bic-mskcc/bicrnaseq: MSKCC Bioinformatics Core RNASeq
Description
Find potential sample mislabeling errors by viewing distances
between every pair of samples. Save plot to PDF file.
Find potential sample mislabeling errors by viewing distances
between every pair of samples. Save plot to PDF file.
Usage
1
2
3
bic.sample.to.sample.distances(cds, conds, file = NULL)
bic.sample.to.sample.distances(cds, conds, file = NULL)
Arguments
cds
DESeq countDataSet
conds
vector of sample conditions that was used to generate cds
file
PDF file to which heatmap whould be saved (optional)
cds
DESeq countDataSet
conds
vector of sample conditions that was used to generate cds
file
PDF file to which heatmap whould be saved (optional)
bic-mskcc/bicrnaseq documentation built on May 24, 2019, 3:04 a.m.
R Package Documentation
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Description
Find potential sample mislabeling errors by viewing distances between every pair of samples. Save plot to PDF file.
Find potential sample mislabeling errors by viewing distances between every pair of samples. Save plot to PDF file.
Usage
1 2 3 | bic.sample.to.sample.distances(cds, conds, file = NULL)
bic.sample.to.sample.distances(cds, conds, file = NULL)
|
Arguments
cds |
DESeq countDataSet |
conds |
vector of sample conditions that was used to generate |
file |
PDF file to which heatmap whould be saved (optional) |
cds |
DESeq countDataSet |
conds |
vector of sample conditions that was used to generate |
file |
PDF file to which heatmap whould be saved (optional) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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