generate_dimred_plots_section: Generate a section with dimred plots used in some RMarkdown...

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generate_dimred_plots_sectionR Documentation

Generate a section with dimred plots used in some RMarkdown files.

Description

The hierarchy is composed of tabsets:

  • Dimred (UMAP, t-SNE, PCA)

    • Dimred plots of selected variables

Usage

generate_dimred_plots_section(
  dimred_plots_other_vars_files,
  selected_markers_plots_files,
  dimred_plots_rel_start = ".",
  selected_markers_files_rel_start = ".",
  main_header = "Dimensionality reduction",
  main_header_level = 1
)

Arguments

dimred_plots_other_vars_files

A tibble.

selected_markers_plots_files

A tibble.

dimred_plots_rel_start, selected_markers_files_rel_start

A character scalar: relative start of path to directory with dimred plots or selected markers. See the Relative links section in create_a_link().

main_header

A character scalar: text of the main header.

main_header_level

A numeric scalar: level of the main header.

Value

Invisibly NULL, Markdown elements are directly printed to stdout.


bioinfocz/scdrake documentation built on Sept. 19, 2024, 4:43 p.m.